BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017A10LP1|AL427103
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig520 1401 0.0
3x_Contig849 393 e-109
>3x_Contig520
Length = 1382
Score = 1401 bits (706), Expect = 0.0
Identities = 711/714 (99%)
Strand = Plus / Plus
Query: 254 atgcaaacaggaatacatacttccgtacctcgctagatattattctgatatcggtattag 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgcaaacaggaatacatacttccgtacctcgctagatattattctgatatcggtattag 60
Query: 314 ggagagtaatattagtgtgtgtcatgggtaaggctaagaagaccagaaagtttgcgcttg 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggagagtaatattagtgtgtgtcatgggtaaggctaagaagaccagaaagtttgcgcttg 120
Query: 374 tgaagcggacattgaatgcaaagaaggattcaagactcaaatcgaaccaggcaaaagagg 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaagcggacattgaatgcaaagaaggattcaagactcaaatcgaaccaggcaaaagagg 180
Query: 434 ttaagaaagatgatcctgagttgactaaaaacattccacaagtatccagtgcattgttct 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaagaaagatgatcctgagttgactaaaaacattccacaagtatccagtgcattgttct 240
Query: 494 tccaatataatgaagctatcaagcctccatatcaggtactcatcgatacaaatttcatca 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccaatataatgaagctatcaagcctccatatcaggtactcatcgatacaaatttcatca 300
Query: 554 atttctctattcaaaagaagattgacatagtgaaaggtatgatggattgtcttttggcca 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atttctctattcaaaagaagattgacatagtgaaaggtatgatggattgtcttttggcca 360
Query: 614 agtgtaacatattgataacagactgtgtgatggctgaattagagaagttgggtcccaagt 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtgtaacatattgataacagactgtgtgatggctgaattagagaagttgggtcccaagt 420
Query: 674 atcgtatagcgttgaagctagctcgtgatccgcgaatcaagaggctaagttgttcgcata 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcgtatagcgttgaagctagctcgtgatccgcgaatcaagaggctaagttgttcgcata 480
Query: 734 agggtacttatgcggatgactgtattgttcatagagtgttgcagcacaagtgttacattg 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agggtacttatgcggatgactgtattgttcatagagtgttgcagcacaagtgttacattg 540
Query: 794 ttgccacgaacgatgctggtttaaagcagagagtkaggaaagtgccggggatcccattga 853
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 541 ttgccacgaacgatgctggtttaaagcagagagtgaggaaagtgccggggatcccattga 600
Query: 854 tgagtgttggaggacactcctatgtgattgagaagctaccgggtgtgttctaggataata 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgagtgttggaggacactcctatgtgattgagaagctaccgggtgtgttctaggataata 660
Query: 914 taaaactgggatttagcattatacatagcggtatgagtttgtwtatatatatat 967
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 661 taaaactgggatttagcattatacatagcggtatgagtatgtatatatatatat 714
>3x_Contig849
Length = 3479
Score = 393 bits (198), Expect = e-109
Identities = 204/206 (99%)
Strand = Plus / Minus
Query: 1 atccaatgtttctatatatctggtaaacatcgagcaactatcaaacagtactcacttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atccaatgtttctatatatctggtaaacatcgagcaactatcaaacagtactcacttgcc 147
Query: 61 ttgtctaatctcataccaccatactccatccgatgtagcagattgtgtttccctttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttgtctaatctcataccaccatactccatccgatgtagcagattgtgtttccctttcttt 87
Query: 121 ttgtcttatgctggtcagatgcacagtgcttcactgaaaattttcaaaaaacctttagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 86 ttgtcttatgctggtcagatgcacagtgcttcactgaaaattttcaaaaaacctttaaga 27
Query: 181 ttattctttcacgttttaataatatg 206
||||||||||||||||||||||||||
Sbjct: 26 ttattctttcacgttttaataatatg 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,264
Number of Sequences: 1807
Number of extensions: 10264
Number of successful extensions: 598
Number of sequences better than 1.0e-20: 2
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)